Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61843189 | chr10:43532211 | C/T | 4.56E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843190 | chr10:43532838 | G/A | 6.11E-5 | 282 | 25.62 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843191 | chr10:43535543 | C/T | 2.12E-5 | 285 | 25.78 | 24.57 | 11.43 | KM Plot |
| KIRP | rs61843192 | chr10:43537384 | C/T | 4.17E-5 | 285 | 25.63 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843194 | chr10:43539023 | C/T | 4.17E-5 | 285 | 25.63 | 25.5 | 11.43 | KM Plot |
| KIRP | rs61843196 | chr10:43541644 | G/A | 5.0E-5 | 289 | 25.63 | 25.7 | 11.43 | KM Plot |
| KIRP | rs61843197 | chr10:43543407 | G/A | 4.99E-5 | 288 | 25.63 | 25.6 | 11.43 | KM Plot |
| KIRP | rs61843198 | chr10:43543489 | G/A | 4.99E-5 | 287 | 25.63 | 25.7 | 11.43 | KM Plot |
| KIRP | rs61843199 | chr10:43544751 | G/A | 6.13E-5 | 286 | 25.63 | 25.6 | 11.43 | KM Plot |
| KIRP | rs61843201 | chr10:43544771 | C/T | 6.13E-5 | 286 | 25.63 | 25.6 | 11.43 | KM Plot |
| KIRP | rs61843202 | chr10:43544797 | G/T | 6.13E-5 | 286 | 25.63 | 25.6 | 11.43 | KM Plot |
| KIRP | rs61843375 | chr10:43379364 | T/C | 7.79E-5 | 286 | 25.62 | 26.63 | 11.43 | KM Plot |
| KIRP | rs61843376 | chr10:43379748 | G/C | 7.98E-5 | 285 | 25.62 | 26.52 | 11.43 | KM Plot |
| KIRP | rs61843378 | chr10:43381672 | T/C | 8.52E-5 | 283 | 25.62 | 26.73 | 11.43 | KM Plot |
| KIRP | rs61843379 | chr10:43382298 | A/G | 8.65E-5 | 282 | 25.7 | 25.95 | 11.43 | KM Plot |